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<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:ali="http://www.niso.org/schemas/ali/1.0/" article-type="other" dtd-version="1.2" xml:lang="en"><front><journal-meta><journal-id journal-id-type="publisher-id">Advances in Molecular Oncology</journal-id><journal-title-group><journal-title xml:lang="en">Advances in Molecular Oncology</journal-title><trans-title-group xml:lang="ru"><trans-title>Успехи молекулярной онкологии</trans-title></trans-title-group></journal-title-group><issn publication-format="print">2313-805X</issn><issn publication-format="electronic">2413-3787</issn><publisher><publisher-name xml:lang="en">Publishing House ABV Press</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="publisher-id">460</article-id><article-id pub-id-type="doi">10.17650/2313-805X-2022-9-3-69-84</article-id><article-categories><subj-group subj-group-type="toc-heading" xml:lang="en"><subject>RESEARCH ARTICLES</subject></subj-group><subj-group subj-group-type="toc-heading" xml:lang="ru"><subject>ЭКСПЕРИМЕНТАЛЬНЫЕ СТАТЬИ</subject></subj-group><subj-group subj-group-type="article-type"><subject></subject></subj-group></article-categories><title-group><article-title xml:lang="en">Mutation profile of diffuse large B-cell lymphoma with relapses in the central nervous system</article-title><trans-title-group xml:lang="ru"><trans-title>Мутационный профиль диффузной В-крупноклеточной лимфомы с рецидивами в центральной нервной системе</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-7542-7285</contrib-id><name-alternatives><name xml:lang="en"><surname>Voropaeva</surname><given-names>E. N.</given-names></name><name xml:lang="ru"><surname>Воропаева</surname><given-names>Е. Н.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>Elena N. Voropaeva.</p><p>175/1 Boris Bogatkov St., Novosibirsk 630089; 52 Krasny Prospekt, Novosibirsk 630091.</p></bio><bio xml:lang="ru"><p>Воропаева Елена Николаевна.</p><p>630089 Новосибирск, ул. Бориса Богаткова, 175 / 1; 630091 Новосибирск, Красный проспект, 52.</p></bio><email>vena.81@mail.ru</email><xref ref-type="aff" rid="aff1"/><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Pospelova</surname><given-names>T. I.</given-names></name><name xml:lang="ru"><surname>Поспелова</surname><given-names>Т. И.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>52 Krasny Prospekt, Novosibirsk 630091.</p></bio><bio xml:lang="ru"><p>630091 Новосибирск, Красный проспект, 52.</p></bio><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-6887-3172</contrib-id><name-alternatives><name xml:lang="en"><surname>Karpova</surname><given-names>V. S.</given-names></name><name xml:lang="ru"><surname>Карпова</surname><given-names>В. С.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>52 Krasny Prospekt, Novosibirsk 630091.</p></bio><bio xml:lang="ru"><p>630091 Новосибирск, Красный проспект, 52.</p></bio><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-1301-5944</contrib-id><name-alternatives><name xml:lang="en"><surname>Churkina</surname><given-names>M. I.</given-names></name><name xml:lang="ru"><surname>Чуркина</surname><given-names>М. И.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>52 Krasny Prospekt, Novosibirsk 630091.</p></bio><bio xml:lang="ru"><p>630091 Новосибирск, Красный проспект, 52.</p></bio><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><name-alternatives><name xml:lang="en"><surname>Vyatkin</surname><given-names>Yu. V.</given-names></name><name xml:lang="ru"><surname>Вяткин</surname><given-names>Ю. В.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>1 Pirogova St., Novosibirsk 630090.</p></bio><bio xml:lang="ru"><p>630090 Новосибирск, ул. Пирогова, 1.</p></bio><xref ref-type="aff" rid="aff3"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-7933-8394</contrib-id><name-alternatives><name xml:lang="en"><surname>Ageeva</surname><given-names>T. A.</given-names></name><name xml:lang="ru"><surname>Агеева</surname><given-names>Т. А.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>52 Krasny Prospekt, Novosibirsk 630091.</p></bio><bio xml:lang="ru"><p>630091 Новосибирск, Красный проспект, 52.</p></bio><xref ref-type="aff" rid="aff2"/></contrib><contrib contrib-type="author"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-7165-4496</contrib-id><name-alternatives><name xml:lang="en"><surname>Maksimov</surname><given-names>V. N.</given-names></name><name xml:lang="ru"><surname>Максимов</surname><given-names>В. Н.</given-names></name></name-alternatives><address><country country="RU">Russian Federation</country></address><bio xml:lang="en"><p>175/1 Boris Bogatkov St., Novosibirsk 630089. </p></bio><bio xml:lang="ru"><p>630089 Новосибирск, ул. Бориса Богаткова, 175 / 1.</p></bio><xref ref-type="aff" rid="aff1"/></contrib></contrib-group><aff-alternatives id="aff1"><aff><institution xml:lang="en">Scientific Research Institute of Therapy and Preventive Medicine — branch of the Federal Research Center Institute of Cytology and Genetics of the Siberian branch of the Russian Academy of Sciences</institution></aff><aff><institution xml:lang="ru">Научно-исследовательский институт терапии и профилактической медицины – филиал ФГБНУ «Федеральный исследовательский центр Институт цитологии и генетики Сибирского отделения Российской академии наук»</institution></aff></aff-alternatives><aff-alternatives id="aff2"><aff><institution xml:lang="en">Novosibirsk State Medical University, Ministry of Health of Russia</institution></aff><aff><institution xml:lang="ru">ФГБОУ ВО «Новосибирский государственный медицинский университет» Минздрава России</institution></aff></aff-alternatives><aff-alternatives id="aff3"><aff><institution xml:lang="en">Novosibirsk National Research State University</institution></aff><aff><institution xml:lang="ru">ФГАОУ ВО «Новосибирский национальный исследовательский государственный университет»</institution></aff></aff-alternatives><pub-date date-type="pub" iso-8601-date="2022-09-15" publication-format="electronic"><day>15</day><month>09</month><year>2022</year></pub-date><volume>9</volume><issue>3</issue><issue-title xml:lang="en"/><issue-title xml:lang="ru"/><fpage>69</fpage><lpage>84</lpage><history><date date-type="received" iso-8601-date="2022-10-07"><day>07</day><month>10</month><year>2022</year></date><date date-type="accepted" iso-8601-date="2022-10-07"><day>07</day><month>10</month><year>2022</year></date></history><permissions><copyright-statement xml:lang="en">Copyright ©; 2022, Voropaeva E.N., Pospelova T.I., Karpova V.S., Churkina M.I., Vyatkin Y.V., Ageeva T.A., Maksimov V.N.</copyright-statement><copyright-statement xml:lang="ru">Copyright ©; 2022, Воропаева Е.Н., Поспелова Т.И., Карпова В.С., Чуркина М.И., Вяткин Ю.В., Агеева Т.А., Максимов В.Н.</copyright-statement><copyright-year>2022</copyright-year><copyright-holder xml:lang="en">Voropaeva E.N., Pospelova T.I., Karpova V.S., Churkina M.I., Vyatkin Y.V., Ageeva T.A., Maksimov V.N.</copyright-holder><copyright-holder xml:lang="ru">Воропаева Е.Н., Поспелова Т.И., Карпова В.С., Чуркина М.И., Вяткин Ю.В., Агеева Т.А., Максимов В.Н.</copyright-holder><ali:free_to_read xmlns:ali="http://www.niso.org/schemas/ali/1.0/"/><license><ali:license_ref xmlns:ali="http://www.niso.org/schemas/ali/1.0/">https://creativecommons.org/licenses/by/4.0</ali:license_ref></license></permissions><self-uri xlink:href="https://umo.abvpress.ru/jour/article/view/460">https://umo.abvpress.ru/jour/article/view/460</self-uri><abstract xml:lang="en"><p><bold>Introduction</bold>. The recurrence of diffuse large B-cell cell lymphoma in the central nervous system in the vast majority of cases is a fatal manifestation of the disease. The study of the lymphoma mutational profile can improve the accuracy of the prognosis of relapse in the central nervous system and justify the selection of patients for preventive treatment. Aim. To evaluate the mutational profile of cases of diffuse large B-cell cell lymphoma with central nervous system damage in relapse based on the results of our own experiment on high-performance sequencing.</p><p><bold>Materials and methods</bold>. On the Illumina platform, full-exome sequencing of diagnostic samples of diffuse large B-cell cell lymphoma with relapses in the central nervous system was performed. A panel including more than 70 genes was analyzed.</p><p><bold>Results</bold>. Four main groups of genetic events can be distinguished in the group of studied samples, namely: combined mutations in the NF-kB (<italic>MYD88, NOTCH1, CD79B, CARD11</italic>) and JAK-STAT (<italic>PIM1, STAT6</italic>) signaling pathways, as well as aberrations in the main oncosuppressor <italic>TP53</italic> and chromatin remodeling system genes (<italic>ARID1A, KMT2D, EP300, SMARCA4</italic>). A recurrent mutation c. 794T&gt;C, p.L265P <italic>MYD88</italic> was detected in the study group. Among other findings, mutations in the CIITA and <italic>CD58</italic> genes should be noted, which are important in avoiding tumor cells from immune surveillance.</p><p><bold>Conclusion</bold>. Despite the apparent heterogeneity of the mutational profile of diffuse large B-cell cell lymphoma with relapses in the central nervous system, in most cases, tumor cells were characterized by genetic disorders leading to the production of a large number of pro-inflammatory cytokines by malignant lymphocytes, as well as aberrations that reduce immunogenicity and contribute to the avoidance of immune surveillance by the tumor.</p></abstract><trans-abstract xml:lang="ru"><p><bold>Введение</bold>. Рецидив диффузной в-клеточной крупноклеточной лимфомы в центральной нервной системе в подавляющем большинстве случаев является фатальным проявлением заболевания. изучение мутационного профиля лимфомы может способствовать улучшению точности прогноза рецидива в центральной нервной системе и обоснованию отбора пациентов для профилактического лечения.</p><p><bold>Цель исследования</bold> - изучить мутационный профиль случаев диффузной в-клеточной крупноклеточной лимфомы с рецидивами в центральной нервной системе.</p><p><bold>Материалы и методы</bold>. На платформе Illumina выполнено полноэкзомное секвенирование диагностических образцов диффузной в-клеточной крупноклеточной лимфомы с рецидивами в центральной нервной системе. проанализирована панель, включающая более 70 генов.</p><p><bold>Результаты</bold>. можно выделить 4 основные группы генетических событий в исследованных образцах, а именно: сочетанные мутации в генах сигнальных путей NF-кВ (<italic>MYD88, NOTCH1, CD79B, CARD11</italic>) и JAK-STAT (<italic>PIM1, STAT6</italic>), а также аберрации в главном онкосупрессоре <italic>ТР53</italic> и генах системы ремоделирования хроматина (<italic>ARID1A, KMT2D, EP300, SMARCA4</italic>). в группе исследования выявлена рекуррентная мутация c. 794T&gt;C, p.L265P MYD88. Среди других находок следует отметить мутации в генах <italic>CIITA</italic> и <italic>CD58</italic>, имеющих значение в уклонении опухолевых клеток от иммунного надзора.</p><p><bold>Заключение</bold>. Несмотря на кажущуюся гетерогенность мутационного профиля диффузной в-клеточной крупноклеточной лимфомы с рецидивами в центральной нервной системе, в большинстве случаев для опухолевых клеток были характерны генетические нарушения, приводящие к продукции злокачественными лимфоцитами большого количества провоспалительных цитокинов, а также аберрации, снижающие иммуногенность и способствующие избеганию опухолью иммунного надзора.</p></trans-abstract><kwd-group xml:lang="en"><kwd>lymphoma</kwd><kwd>mutational profile</kwd><kwd>high-throughput sequencing</kwd><kwd>relapse</kwd><kwd>NF-kB signaling pathway</kwd><kwd>JAK-STAT signaling pathway</kwd><kwd><italic>ТР53</italic> gene</kwd><kwd>chromatin remodeling</kwd><kwd>immunological control</kwd><kwd>diffuse large B-cell lymphoma</kwd><kwd>central nervous system</kwd></kwd-group><kwd-group xml:lang="ru"><kwd>лимфома</kwd><kwd>мутационный профиль</kwd><kwd>высокопроизводительное секвенирование</kwd><kwd>рецидив</kwd><kwd>сигнальный путь NF-kB</kwd><kwd>сигнальный путь JAK-STAT</kwd><kwd>ген <italic>ТР53</italic></kwd><kwd>ремоделирование хроматина</kwd><kwd>иммунологический контроль</kwd><kwd>центральная нервная система</kwd><kwd>диффузная в-клеточная крупноклеточная лимфома</kwd></kwd-group><funding-group><funding-statement xml:lang="en">The work was performed with the financial support of the grant of the President of the Russian Federation to young scientists MD-2706.2019.7. 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